.. Developers can add a TOC reference to the index file under doc/user

PacBio Bioinformatics Tools
===========================

Contents:

.. toctree::
   :maxdepth: 2

   ConsensusTools/doc/index
   CorrelatedVariants/doc/index
   CeleraAssembler/doc/index
   GenomicConsensus/doc/index
   kineticsTools/doc/index
   pbaha/doc/index
   pbalign/doc/index
   pbbarcode/doc/index
   pbh5tools/doc/index
   pbreports/doc/index
   pbsamtools/doc/index