com.pacbio.secondary.vis.data.contig

Class ContigInfo

java.lang.Object

com.pacbio.secondary.vis.data.contig.ContigInfo

Direct Known Subclasses:

DeNovoContigInfo

public class ContigInfo
extends java.lang.Object

Field Summary

Fields

Modifier and Type	Field and Description
protected int	contig_length
protected java.lang.String	header
protected java.lang.String	id
protected java.lang.String	name
protected java.lang.String	sequence_file

Constructor Summary

Constructors

Constructor and Description
ContigInfo()

Method Summary

Methods

Modifier and Type	Method and Description
int	getContigLength()
int	getContigMaxRange()
java.lang.String	getHeader()
java.lang.String	getId()
java.lang.String	getName()
java.lang.String	getSequenceFile()
void	setContig_length(int contigLength)
void	setHeader(java.lang.String header)
void	setId(java.lang.String id)
void	setName(java.lang.String name)
void	setSequenceFile(java.lang.String sequenceFile)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

name

protected java.lang.String name

id

protected java.lang.String id

header

protected java.lang.String header

sequence_file

protected java.lang.String sequence_file

contig_length

protected int contig_length

Constructor Detail

ContigInfo

public ContigInfo()

Method Detail

getName

public java.lang.String getName()

setName

public void setName(java.lang.String name)

getId

public java.lang.String getId()

setId

public void setId(java.lang.String id)

getHeader

public java.lang.String getHeader()

setHeader

public void setHeader(java.lang.String header)

getSequenceFile

public java.lang.String getSequenceFile()

setSequenceFile

public void setSequenceFile(java.lang.String sequenceFile)

getContigLength

public int getContigLength()

setContig_length

public void setContig_length(int contigLength)

getContigMaxRange

public int getContigMaxRange()