Uses of Package
com.pacbio.secondary.vis.data.db

Packages that use com.pacbio.secondary.vis.data.db

Package	Description
com.pacbio.secondary.vis.common.utils	Client/Server common utilities
com.pacbio.secondary.vis.data.db	Ideogram and genes collections support
com.pacbio.secondary.vis.data.session	Client side user session data models
com.pacbio.secondary.vis.gui.app	Main application classes, support local, remote, webstart based deployment
com.pacbio.secondary.vis.gui.draw.views	Genomic views
com.pacbio.secondary.vis.gui.frame	Client application main frame
com.pacbio.secondary.vis.io.motifs	Parser for Motifs files

Classes in com.pacbio.secondary.vis.data.db used by com.pacbio.secondary.vis.common.utils

Class and Description
IdeogramDB Database class for the NCBI ideogram database.

Classes in com.pacbio.secondary.vis.data.db used by com.pacbio.secondary.vis.data.db

Class and Description
MotifData stores stats about a motif

Classes in com.pacbio.secondary.vis.data.db used by com.pacbio.secondary.vis.data.session

Class and Description
GeneDB Loads the NCBI gene database seq_gene.md
IdeogramDB Database class for the NCBI ideogram database.
MotifsDB stores motif summary data

Classes in com.pacbio.secondary.vis.data.db used by com.pacbio.secondary.vis.gui.app

Class and Description
GeneDB Loads the NCBI gene database seq_gene.md
IdeogramDB Database class for the NCBI ideogram database.

Classes in com.pacbio.secondary.vis.data.db used by com.pacbio.secondary.vis.gui.draw.views

Class and Description
GeneDB Loads the NCBI gene database seq_gene.md
IdeogramDB Database class for the NCBI ideogram database.

Classes in com.pacbio.secondary.vis.data.db used by com.pacbio.secondary.vis.gui.frame

Class and Description
GeneDB Loads the NCBI gene database seq_gene.md
IdeogramDB Database class for the NCBI ideogram database.

Classes in com.pacbio.secondary.vis.data.db used by com.pacbio.secondary.vis.io.motifs

Class and Description
MotifData stores stats about a motif