Uses of Interface
com.pacbio.secondary.vis.data.variableresolution.model.IVariableResolutionDataModelServer

Packages that use IVariableResolutionDataModelServer

Package	Description
com.pacbio.secondary.vis.data.variableresolution.model	Variable resolution data models
com.pacbio.secondary.vis.data.variableresolution.model.gff	GFF3 variable resolution data model
com.pacbio.secondary.vis.io.gff	GFF3 reader support
com.pacbio.secondary.vis.io.gff.modifications	GFF3 Base Modifications Info support
com.pacbio.secondary.vis.io.gff.summary	GFF3 Summary Info support
com.pacbio.secondary.vis.io.gff.variants	GFF3 variants support
com.pacbio.secondary.vis.io.ucsc.gtf.reader	Parser for UCSC generated gtf (gene transfer format) files
com.pacbio.secondary.vis.io.vcf	Parser for VCF (variants) files

Uses of IVariableResolutionDataModelServer in com.pacbio.secondary.vis.data.variableresolution.model

Classes in com.pacbio.secondary.vis.data.variableresolution.model that implement IVariableResolutionDataModelServer

Modifier and Type	Class and Description
class	VariableResolutionDataModel
class	VariableResolutionDataModelsMerger Merges an array of VariableResolutionDataModelsMerger
class	VariableResolutionDataSet A DataSlot encapsulates one or more GenericDataModel datasets with all configurations.
class	VariableResolutionMemoryDataModel

Fields in com.pacbio.secondary.vis.data.variableresolution.model declared as IVariableResolutionDataModelServer

Modifier and Type	Field and Description
protected IVariableResolutionDataModelServer	VariableResolutionDataSet.output

Fields in com.pacbio.secondary.vis.data.variableresolution.model with type parameters of type IVariableResolutionDataModelServer

Modifier and Type	Field and Description
protected java.util.LinkedList<IVariableResolutionDataModelServer>	VariableResolutionDataSet.sourceModels

Methods in com.pacbio.secondary.vis.data.variableresolution.model that return types with arguments of type IVariableResolutionDataModelServer

Modifier and Type	Method and Description
java.util.Collection<IVariableResolutionDataModelServer>	VariableResolutionDataSet.getModels()

Methods in com.pacbio.secondary.vis.data.variableresolution.model with parameters of type IVariableResolutionDataModelServer

Modifier and Type	Method and Description
void	VariableResolutionDataModelsMerger.addModel(IVariableResolutionDataModelServer model)
void	VariableResolutionDataSet.addModel(IVariableResolutionDataModelServer model)
void	VariableResolutionDataSet.replaceModel(IVariableResolutionDataModelServer model)
protected void	VariableResolutionDataModelsMerger.updateMinMaxValues(IVariableResolutionDataModelServer model)
protected void	VariableResolutionDataSet.updateMinMaxValues(IVariableResolutionDataModelServer model)

Method parameters in com.pacbio.secondary.vis.data.variableresolution.model with type arguments of type IVariableResolutionDataModelServer

Modifier and Type	Method and Description
void	VariableResolutionDataModelsMerger.setModels(java.util.List<IVariableResolutionDataModelServer> newModels)

Uses of IVariableResolutionDataModelServer in com.pacbio.secondary.vis.data.variableresolution.model.gff

Classes in com.pacbio.secondary.vis.data.variableresolution.model.gff that implement IVariableResolutionDataModelServer

Modifier and Type	Class and Description
class	GFFDataModel

Uses of IVariableResolutionDataModelServer in com.pacbio.secondary.vis.io.gff

Classes in com.pacbio.secondary.vis.io.gff that implement IVariableResolutionDataModelServer

Modifier and Type	Class and Description
class	GFF3Reader

Uses of IVariableResolutionDataModelServer in com.pacbio.secondary.vis.io.gff.modifications

Classes in com.pacbio.secondary.vis.io.gff.modifications that implement IVariableResolutionDataModelServer

Modifier and Type	Class and Description
class	GFFModificationsReader

Uses of IVariableResolutionDataModelServer in com.pacbio.secondary.vis.io.gff.summary

Classes in com.pacbio.secondary.vis.io.gff.summary that implement IVariableResolutionDataModelServer

Modifier and Type	Class and Description
class	GFFSummaryReader

Uses of IVariableResolutionDataModelServer in com.pacbio.secondary.vis.io.gff.variants

Classes in com.pacbio.secondary.vis.io.gff.variants that implement IVariableResolutionDataModelServer

Modifier and Type	Class and Description
class	GFFVariantsReader

Uses of IVariableResolutionDataModelServer in com.pacbio.secondary.vis.io.ucsc.gtf.reader

Classes in com.pacbio.secondary.vis.io.ucsc.gtf.reader that implement IVariableResolutionDataModelServer

Modifier and Type	Class and Description
class	UCSCGTFReader

Uses of IVariableResolutionDataModelServer in com.pacbio.secondary.vis.io.vcf

Classes in com.pacbio.secondary.vis.io.vcf that implement IVariableResolutionDataModelServer

Modifier and Type	Class and Description
class	VCFMultiSampleReader
class	VCFReader