com.pacbio.secondary.vis.gui.app

Class LocalTestApp

java.lang.Object

com.pacbio.secondary.vis.gui.app.VioletAppBase

com.pacbio.secondary.vis.gui.app.VioletApp

com.pacbio.secondary.vis.gui.app.LocalTestApp

public class LocalTestApp
extends VioletApp

Nested Class Summary

Nested classes/interfaces inherited from class com.pacbio.secondary.vis.gui.app.VioletAppBase

VioletAppBase.APP_TYPE

Field Summary

Fields inherited from class com.pacbio.secondary.vis.gui.app.VioletAppBase

app_options, app_type, cmd_options, data_storage, last_busy, last_data, last_message, last_progress, main_frame, OPEN_REMOTEDATA_NO_ERROR, rois_storage

Constructor Summary

Constructors

Constructor and Description
LocalTestApp(java.lang.String[] args)

Method Summary

Methods

Modifier and Type	Method and Description
static void	main(java.lang.String[] args)

Methods inherited from class com.pacbio.secondary.vis.gui.app.VioletApp

createAndLoadDataStorage, createAndShowGUI, createCmdOptionsFromRemoteDataSelection, importConsensusSequence, importDataFile, importDataFromInputStream, importGZippedHDFResults, importIPDConsensus, importReferenceSequence, launchHelpTopicInWebBrowser, launchPanelHelpInWebBrowser, launchWebSiteInWebBrowser, loadDefaultWorkspace, loadROIsFromProject, loadWorkspaceFromBase64String, loadWorkspaceFromResource, loadWorkspaceFromServer, saveWorkspaceToServer, selectRemoteData, setLogScaling, setViewFilter, setVisibleLocusDetailsPanel, setVisibleLocusGenomePanel, setVisibleLocusRegionPanel

Methods inherited from class com.pacbio.secondary.vis.gui.app.VioletAppBase

getAppOptions, getAppTitle, getAppType, getCommandLineOptions, getDataStorage, getDetailsOptions, getGeneDB, getHDFServiceURL, getHostCodebaseHttpPort, getHostName, getIdeogramDB, getJNLPServiceURL, getReferenceInfo, getRegionsOfInterestStorage, getSlots, getSMRTPortalHomeURL, getSMRTViewHomeURL, getVioletFrame, getVisServiceURL, isScreenResolutionMaximizable, isScreenResolutionValid, isServerInWhiteList, isStandAlone, setApplicationLookAndFeel, setApplicationLookAndFeelOld, setAppOptions, setCurrentContig, setDetailsOptions, setRegionsOfInterestStorage, setStatusBarBusy, setStatusBarDataInfoText, setStatusBarProgress, setStatusBarText, setVioletFrame, showErrorMessageOnDataLoadFailure, updateLockedPanels

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

LocalTestApp

public LocalTestApp(java.lang.String[] args)

Method Detail

main

public static void main(java.lang.String[] args)

Parameters:

args -