com.pacbio.secondary.vis.gui.app

Class WebStartApp

java.lang.Object

com.pacbio.secondary.vis.gui.app.VioletAppBase

com.pacbio.secondary.vis.gui.app.VioletApp

com.pacbio.secondary.vis.gui.app.WebStartApp

public class WebStartApp
extends VioletApp

Author:

Marco Milletti

Nested Class Summary

Nested classes/interfaces inherited from class com.pacbio.secondary.vis.gui.app.VioletAppBase

VioletAppBase.APP_TYPE

Field Summary

Fields inherited from class com.pacbio.secondary.vis.gui.app.VioletAppBase

app_options, app_type, cmd_options, data_storage, last_busy, last_data, last_message, last_progress, main_frame, OPEN_REMOTEDATA_NO_ERROR, rois_storage

Constructor Summary

Constructors

Constructor and Description
WebStartApp(java.lang.String[] args)

Method Summary

Methods

Modifier and Type	Method and Description
int	getHostCodebaseHttpPort()
java.lang.String	getHostName()
protected static boolean	isOffline()
static void	main(java.lang.String[] args)
boolean	saveToClipboard()

Methods inherited from class com.pacbio.secondary.vis.gui.app.VioletApp

createAndLoadDataStorage, createAndShowGUI, createCmdOptionsFromRemoteDataSelection, importConsensusSequence, importDataFile, importDataFromInputStream, importGZippedHDFResults, importIPDConsensus, importReferenceSequence, launchHelpTopicInWebBrowser, launchPanelHelpInWebBrowser, launchWebSiteInWebBrowser, loadDefaultWorkspace, loadROIsFromProject, loadWorkspaceFromBase64String, loadWorkspaceFromResource, loadWorkspaceFromServer, saveWorkspaceToServer, selectRemoteData, setLogScaling, setViewFilter, setVisibleLocusDetailsPanel, setVisibleLocusGenomePanel, setVisibleLocusRegionPanel

Methods inherited from class com.pacbio.secondary.vis.gui.app.VioletAppBase

getAppOptions, getAppTitle, getAppType, getCommandLineOptions, getDataStorage, getDetailsOptions, getGeneDB, getHDFServiceURL, getIdeogramDB, getJNLPServiceURL, getReferenceInfo, getRegionsOfInterestStorage, getSlots, getSMRTPortalHomeURL, getSMRTViewHomeURL, getVioletFrame, getVisServiceURL, isScreenResolutionMaximizable, isScreenResolutionValid, isServerInWhiteList, isStandAlone, setApplicationLookAndFeel, setApplicationLookAndFeelOld, setAppOptions, setCurrentContig, setDetailsOptions, setRegionsOfInterestStorage, setStatusBarBusy, setStatusBarDataInfoText, setStatusBarProgress, setStatusBarText, setVioletFrame, showErrorMessageOnDataLoadFailure, updateLockedPanels

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

WebStartApp

public WebStartApp(java.lang.String[] args)

Method Detail

main

public static void main(java.lang.String[] args)

Parameters:

args -

isOffline

protected static boolean isOffline()

getHostName

public java.lang.String getHostName()

Overrides:

getHostName in class VioletAppBase

getHostCodebaseHttpPort

public int getHostCodebaseHttpPort()

Overrides:

getHostCodebaseHttpPort in class VioletAppBase

saveToClipboard

public boolean saveToClipboard()