Uses of Class
com.pacbio.secondary.vis.gui.draw.views.GenomicViewDetails

Packages that use GenomicViewDetails

Package	Description
com.pacbio.secondary.vis.data.session	Client side user session data models
com.pacbio.secondary.vis.gui.app	Main application classes, support local, remote, webstart based deployment
com.pacbio.secondary.vis.gui.control	Specialized gui controls
com.pacbio.secondary.vis.gui.dialogs	Application dialogs
com.pacbio.secondary.vis.gui.draw.utils	Drawing utilities
com.pacbio.secondary.vis.gui.draw.views	Genomic views
com.pacbio.secondary.vis.gui.frame	Client application main frame
com.pacbio.secondary.vis.io.update	Support for interactive data updates after user preferences changes

Uses of GenomicViewDetails in com.pacbio.secondary.vis.data.session

Methods in com.pacbio.secondary.vis.data.session with parameters of type GenomicViewDetails

Modifier and Type	Method and Description
void	SessionDataHelper.restoreDetailsOptions(GenomicViewDetails view) Restores details options into app
boolean	DetailsStorage.setEpiProReadsDataIfAvailable(EpiProReadsReader model, GenomicViewDetails view, int current_contig, boolean force_redraw)

Uses of GenomicViewDetails in com.pacbio.secondary.vis.gui.app

Methods in com.pacbio.secondary.vis.gui.app with parameters of type GenomicViewDetails

Modifier and Type	Method and Description
boolean	VioletApp.importConsensusSequence(WsFastaSequenceInfo data, GenomicViewDetails view, boolean update)
boolean	VioletApp.importIPDConsensus(WsIPDConsensusInfo data, GenomicViewDetails view, boolean update)
boolean	VioletApp.importReferenceSequence(WsFastaSequenceInfo data, GenomicViewDetails view, boolean update)

Uses of GenomicViewDetails in com.pacbio.secondary.vis.gui.control

Constructors in com.pacbio.secondary.vis.gui.control with parameters of type GenomicViewDetails

Constructor and Description
PaletteCtrl(GenomicViewDetails view)

Uses of GenomicViewDetails in com.pacbio.secondary.vis.gui.dialogs

Methods in com.pacbio.secondary.vis.gui.dialogs that return GenomicViewDetails

Modifier and Type	Method and Description
GenomicViewDetails	PreferencesDialogBase.getView()

Constructors in com.pacbio.secondary.vis.gui.dialogs with parameters of type GenomicViewDetails

Constructor and Description
QVThresholdOptionsPane(javax.swing.event.TableModelListener listener, GenomicViewDetails view)

Uses of GenomicViewDetails in com.pacbio.secondary.vis.gui.draw.utils

Methods in com.pacbio.secondary.vis.gui.draw.utils with parameters of type GenomicViewDetails

Modifier and Type	Method and Description
protected static void	InfoBuilder.addReadHtmlTooltip(GenomicViewDetails view, java.lang.StringBuffer buf, Marker read, java.text.NumberFormat nf, boolean addImage) read tooltip

Uses of GenomicViewDetails in com.pacbio.secondary.vis.gui.draw.views

Subclasses of GenomicViewDetails in com.pacbio.secondary.vis.gui.draw.views

Modifier and Type	Class and Description
class	GenomicViewInspect

Uses of GenomicViewDetails in com.pacbio.secondary.vis.gui.frame

Fields in com.pacbio.secondary.vis.gui.frame declared as GenomicViewDetails

Modifier and Type	Field and Description
protected GenomicViewDetails	VioletFrameBase.details_view

Methods in com.pacbio.secondary.vis.gui.frame that return GenomicViewDetails

Modifier and Type	Method and Description
GenomicViewDetails	VioletFrameBase.getDetailsView()

Uses of GenomicViewDetails in com.pacbio.secondary.vis.io.update

Methods in com.pacbio.secondary.vis.io.update that return GenomicViewDetails

Modifier and Type	Method and Description
protected GenomicViewDetails	UpdateDetailsDataHelper.UpdateDetailsThreadHelper.getDetailsView()
protected GenomicViewDetails	UpdateInsertionsDataHelper.UpdateInsertionsThreadHelper.getDetailsView()