| com.pacbio.secondary.vis.common.collection |
Specialized collection classes
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| com.pacbio.secondary.vis.data.db |
Ideogram and genes collections support
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| com.pacbio.secondary.vis.data.variableresolution.model |
Variable resolution data models
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| com.pacbio.secondary.vis.data.variableresolution.model.gff |
GFF3 variable resolution data model
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| com.pacbio.secondary.vis.gui.dialogs |
Application dialogs
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| com.pacbio.secondary.vis.gui.draw.views |
Genomic views
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| com.pacbio.secondary.vis.gui.evt |
Specialized event handlers
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| com.pacbio.secondary.vis.io.gff |
GFF3 reader support
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| com.pacbio.secondary.vis.io.gff.modifications |
GFF3 Base Modifications Info support
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| com.pacbio.secondary.vis.io.gff.summary |
GFF3 Summary Info support
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| com.pacbio.secondary.vis.io.gff.variants |
GFF3 variants support
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| com.pacbio.secondary.vis.io.ucsc.gtf.reader |
Parser for UCSC generated gtf (gene transfer format) files
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| com.pacbio.secondary.vis.io.vcf |
Parser for VCF (variants) files
|