com.pacbio.secondary.vis.io.hdf.data

Class IPDConsensusTable

java.lang.Object

com.pacbio.secondary.vis.io.hdf.data.UIntMatrixArray

com.pacbio.secondary.vis.io.hdf.data.IPDConsensusTable

public class IPDConsensusTable
extends UIntMatrixArray

Field Summary

Fields inherited from class com.pacbio.secondary.vis.io.hdf.data.UIntMatrixArray

data, num_columns, num_rows

Constructor Summary

Constructors

Constructor and Description
IPDConsensusTable(long num_rows, long num_columns, java.lang.Object data_in)

Method Summary

Methods

Modifier and Type	Method and Description
int	getIPDFwd(int row) lower 2 bytes (16 bits)
int	getIPDRev(int row) upper 2 bytes (16 bits)

Methods inherited from class com.pacbio.secondary.vis.io.hdf.data.UIntMatrixArray

get, get, getData, getNumColumns, getNumRows, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

IPDConsensusTable

public IPDConsensusTable(long num_rows,
                 long num_columns,
                 java.lang.Object data_in)

Parameters:

num_rows -

num_columns -

data_in -

Method Detail

getIPDFwd

public int getIPDFwd(int row)

lower 2 bytes (16 bits)

Parameters:

row -

Returns:

fwd ipd ratio

getIPDRev

public int getIPDRev(int row)

upper 2 bytes (16 bits)

Parameters:

row -

Returns:

rev ipd ratio