Uses of Class
com.pacbio.secondary.vis.io.hdf.data.UIntMatrixArray

Packages that use UIntMatrixArray

Package	Description
com.pacbio.secondary.vis.io.hdf.data	Data models for cmp.h5 file based data representation
com.pacbio.secondary.vis.io.hdf.file.cmph5	Support for reading/writing of cmp.h5 files
com.pacbio.secondary.vis.io.hdf.file.hdf5	Support for reading/writing of HDF5 files

Uses of UIntMatrixArray in com.pacbio.secondary.vis.io.hdf.data

Subclasses of UIntMatrixArray in com.pacbio.secondary.vis.io.hdf.data

Modifier and Type	Class and Description
class	AlignmentIndexTable Simple extension class to store Alignement Index table data.
class	IPDConsensusTable
class	SortedRefIndexTable Simple extension class to store Sorted Ref Index table data.

Uses of UIntMatrixArray in com.pacbio.secondary.vis.io.hdf.file.cmph5

Methods in com.pacbio.secondary.vis.io.hdf.file.cmph5 that return UIntMatrixArray

Modifier and Type	Method and Description
UIntMatrixArray	CMPH5FileBase.getAlignmentIndexDataChunk(H5ScalarDS dataset, HDF5HyperslabInfo info) Reads a chunk of data from alignment index dataset.

Uses of UIntMatrixArray in com.pacbio.secondary.vis.io.hdf.file.hdf5

Methods in com.pacbio.secondary.vis.io.hdf.file.hdf5 that return UIntMatrixArray

Modifier and Type	Method and Description
protected UIntMatrixArray	HDF5File.getUIntDataChunk(H5ScalarDS dataset, HDF5HyperslabInfo info) Reads a chunk of UInt data from a dataset.