com.pacbio.secondary.vis.io.importer

Class DataFileInfo

java.lang.Object

com.pacbio.secondary.vis.io.importer.DataFileInfo

public class DataFileInfo
extends java.lang.Object

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
static class	DataFileInfo.eFileType

Field Summary

Fields

Modifier and Type	Field and Description
protected boolean	bGZipped
protected static java.lang.String	GFFV3Marker
protected DataFileInfo.eFileType	type

Constructor Summary

Constructors

Constructor and Description
DataFileInfo(java.io.File file, VioletApp app)
DataFileInfo(java.lang.String file_name, VioletApp app) Open and analyze file to find out what type it is and if it requires sub-sampling Called by background (from server) loader

Method Summary

Methods

Modifier and Type	Method and Description
DataFileInfo.eFileType	getFileType()
java.lang.String	getFileTypeAsString()
boolean	getGZipped()
protected void	lookIntoFile(java.lang.String file_name, VioletApp app)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

GFFV3Marker

protected static final java.lang.String GFFV3Marker

See Also:

Constant Field Values

type

protected DataFileInfo.eFileType type

bGZipped

protected boolean bGZipped

Constructor Detail

DataFileInfo

public DataFileInfo(java.lang.String file_name,
            VioletApp app)

Open and analyze file to find out what type it is and if it requires sub-sampling Called by background (from server) loader

DataFileInfo

public DataFileInfo(java.io.File file,
            VioletApp app)

Method Detail

lookIntoFile

protected void lookIntoFile(java.lang.String file_name,
                VioletApp app)

Parameters:

file_name -

app -

getFileType

public DataFileInfo.eFileType getFileType()

getGZipped

public boolean getGZipped()

getFileTypeAsString

public java.lang.String getFileTypeAsString()