Uses of Class com.pacbio.secondary.vis.io.indexer.indexinfo.GFFIndexInfo (SMRT View)

Packages that use GFFIndexInfo
Package	Description
com.pacbio.secondary.vis.io.indexer.gff	GFF indexer
com.pacbio.secondary.vis.io.indexer.gff.metadata	GFF3 metadata info

Method parameters in com.pacbio.secondary.vis.io.indexer.gff with type arguments of type GFFIndexInfo
Modifier and Type	Method and Description
`protected void`	GFFIndexer.`scanGFFV2Slice(java.util.List<GFFIndexInfo> indexes, GFFMetadataInfoCalculator row_info, java.lang.String slice, int chunk_idx)` this method scans a slice of data to find an F3 read and stores the info into the indexes array

Fields in com.pacbio.secondary.vis.io.indexer.gff.metadata with type parameters of type GFFIndexInfo
Modifier and Type	Field and Description
`java.util.ArrayList<GFFIndexInfo>`	GFFMetadataInfo.`indexes`

Uses of Classcom.pacbio.secondary.vis.io.indexer.indexinfo.GFFIndexInfo