com.pacbio.secondary.vis.svc.server.data

Class WsReadEx

java.lang.Object

com.pacbio.secondary.vis.svc.server.data.WsRead

com.pacbio.secondary.vis.svc.server.data.WsReadEx

All Implemented Interfaces:

java.io.Serializable, java.lang.Comparable<WsRead>

public class WsReadEx
extends WsRead
implements java.io.Serializable

See Also:

Serialized Form

Field Summary

Fields

Modifier and Type	Field and Description
protected int	row_index

Fields inherited from class com.pacbio.secondary.vis.svc.server.data.WsRead

ann, intv, lane, molid, name, qv, scor, seq, structid

Constructor Summary

Constructors

Modifier	Constructor and Description
protected	WsReadEx() serialization only
	WsReadEx(int row_index, java.lang.String name, int contig, int start, int stop, byte strand, double score, int molid, int structid)

Method Summary

Methods

Modifier and Type	Method and Description
int	getRowIndex()
void	setRowIndex(int row_index)

Methods inherited from class com.pacbio.secondary.vis.svc.server.data.WsRead

clipReadTo, compareTo, getAnn, getIntv, getLane, getMolid, getName, getNumBasesFromMarkerRead, getQv, getQv, getScor, getSeq, getStructid, getTimeFromMarkerRead, setAnn, setIntv, setLane, setMolid, setName, setQv, setScor, setSeq, setStructid, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

row_index

protected transient int row_index

Constructor Detail

WsReadEx

protected WsReadEx()

serialization only

WsReadEx

public WsReadEx(int row_index,
        java.lang.String name,
        int contig,
        int start,
        int stop,
        byte strand,
        double score,
        int molid,
        int structid)

Method Detail

getRowIndex

public int getRowIndex()

setRowIndex

public void setRowIndex(int row_index)