com.pacbio.secondary.vis.svc.server.data

Class WsResults

java.lang.Object

com.pacbio.secondary.vis.svc.server.data.WsResults

All Implemented Interfaces:

java.io.Serializable

public class WsResults
extends java.lang.Object
implements java.io.Serializable

This is an abstraction to represent a set of results and associated detailed metadata

Author:

mmilletti

See Also:

Serialized Form

Field Summary

Fields

Modifier and Type	Field and Description
protected GraphStructure	graph
protected WsResultsInfo	info
protected WsRead[]	reads

Constructor Summary

Constructors

Modifier	Constructor and Description
protected	WsResults() de-serialization only
	WsResults(java.lang.String status)
	WsResults(WsResultsInfo info)

Method Summary

Methods

Modifier and Type	Method and Description
void	clipReadsTo(int start, int length) used to clip reads for msa/insertions view
GraphStructure	getGraph()
static byte[]	getGZippedError(java.lang.String error) Returns gzipped error code
WsResultsInfo	getInfo()
WsRead[]	getReads()
void	setGraph(GraphStructure structure)
void	setInfo(WsResultsInfo info)
void	setReads(WsRead[] data)
java.lang.String	toString()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

info

protected WsResultsInfo info

reads

protected WsRead[] reads

graph

protected GraphStructure graph

Constructor Detail

WsResults

public WsResults(java.lang.String status)

WsResults

public WsResults(WsResultsInfo info)

WsResults

protected WsResults()

de-serialization only

Method Detail

getInfo

public WsResultsInfo getInfo()

setInfo

public void setInfo(WsResultsInfo info)

getReads

public WsRead[] getReads()

setReads

public void setReads(WsRead[] data)

getGraph

public GraphStructure getGraph()

setGraph

public void setGraph(GraphStructure structure)

clipReadsTo

public void clipReadsTo(int start,
               int length)

used to clip reads for msa/insertions view

Parameters:

start -

length -

getGZippedError

public static byte[] getGZippedError(java.lang.String error)

Returns gzipped error code

Parameters:

error -

Returns:

toString

public java.lang.String toString()

Overrides:

toString in class java.lang.Object