com.pacbio.secondary.vis.svc.server.jnlp

Class JNLPFileWrapper

java.lang.Object

com.pacbio.secondary.vis.svc.server.jnlp.JNLPFileWrapper

public class JNLPFileWrapper
extends java.lang.Object

Author:

mmilletti

Field Summary

Fields

Modifier and Type	Field and Description
protected java.lang.String	host_name
protected java.lang.String	httpport
protected static java.lang.String	JNLP_32BIT_SEARCH_TAG
protected static java.lang.String	JNLP_64BIT_REPLACE_TAG
protected static java.lang.String	JNLP_ARGUMENT_SEARCH_TAG
protected static java.lang.String	JNLP_HOST_NAME_TAG
protected static java.lang.String	JNLP_HTTPPORT_NAME_TAG
protected static java.lang.String	JNLP_TEMPLATE
protected static java.lang.String	JNLP_VERSION_TAG

Constructor Summary

Constructors

Constructor and Description
JNLPFileWrapper() used by server side
JNLPFileWrapper(java.lang.String host, java.lang.String port) used by client to save session using current host/port info...

Method Summary

Methods

Modifier and Type	Method and Description
java.lang.String	getJNLPForProjectFile(java.lang.String[] cmdline, byte[] workspace, byte[] session, boolean is64bit) Used to save current jnlp
java.lang.String	getJNLPFromCmdLine(java.lang.String[] cmdline, boolean is64bit) Used to get jnlp from job id as number.
java.lang.String	getJNLPFromDataAndTrackFile(java.lang.String data_file_path, java.lang.String reference_info_path, java.lang.String tracks_info, java.lang.String user_path, java.lang.String options, boolean is64bit)
java.lang.String	getJNLPFromDataFile(java.lang.String data_file_path, java.lang.String reference_info_path, java.lang.String options, boolean is64bit)
java.lang.String	getJNLPFromJobId(long job_id, boolean is64bit) Used to get jnlp from job id as number.
java.lang.String	getJNLPFromJobMetadataAndTrackFile(java.lang.String metadata_path, java.lang.String reference_info_path, java.lang.String tracks_info, java.lang.String user_path, java.lang.String options, boolean is64bit)
java.lang.String	getJNLPFromJobMetadataFile(java.lang.String metadata_path, java.lang.String reference_info_path, java.lang.String options, boolean is64bit)
java.lang.String	getSMRTJNLPOptions(java.lang.String options)
static void	main(java.lang.String[] args)
protected java.lang.String	readJNLPTemplateFromResource(java.lang.String name, boolean is64bit) Retrieves the jnlp template from the jar file

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

JNLP_TEMPLATE

protected static final java.lang.String JNLP_TEMPLATE

See Also:

Constant Field Values

JNLP_HOST_NAME_TAG

protected static final java.lang.String JNLP_HOST_NAME_TAG

See Also:

Constant Field Values

JNLP_HTTPPORT_NAME_TAG

protected static final java.lang.String JNLP_HTTPPORT_NAME_TAG

See Also:

Constant Field Values

JNLP_VERSION_TAG

protected static final java.lang.String JNLP_VERSION_TAG

See Also:

Constant Field Values

JNLP_ARGUMENT_SEARCH_TAG

protected static final java.lang.String JNLP_ARGUMENT_SEARCH_TAG

See Also:

Constant Field Values

JNLP_32BIT_SEARCH_TAG

protected static final java.lang.String JNLP_32BIT_SEARCH_TAG

See Also:

Constant Field Values

JNLP_64BIT_REPLACE_TAG

protected static final java.lang.String JNLP_64BIT_REPLACE_TAG

See Also:

Constant Field Values

host_name

protected java.lang.String host_name

httpport

protected java.lang.String httpport

Constructor Detail

JNLPFileWrapper

public JNLPFileWrapper()

used by server side

JNLPFileWrapper

public JNLPFileWrapper(java.lang.String host,
               java.lang.String port)

used by client to save session using current host/port info...

Parameters:

host -

port -

Method Detail

getJNLPFromJobMetadataFile

public java.lang.String getJNLPFromJobMetadataFile(java.lang.String metadata_path,
                                          java.lang.String reference_info_path,
                                          java.lang.String options,
                                          boolean is64bit)

Parameters:

metadata_path -

is64bit -

Returns:

getJNLPFromJobMetadataAndTrackFile

public java.lang.String getJNLPFromJobMetadataAndTrackFile(java.lang.String metadata_path,
                                                  java.lang.String reference_info_path,
                                                  java.lang.String tracks_info,
                                                  java.lang.String user_path,
                                                  java.lang.String options,
                                                  boolean is64bit)

Parameters:

metadata_path -

reference_info_path -

tracks_info -

user_path -

options -

is64bit -

Returns:

getJNLPFromDataFile

public java.lang.String getJNLPFromDataFile(java.lang.String data_file_path,
                                   java.lang.String reference_info_path,
                                   java.lang.String options,
                                   boolean is64bit)

Parameters:

data_file_path -

reference_info_path -

is64bit -

Returns:

getJNLPFromDataAndTrackFile

public java.lang.String getJNLPFromDataAndTrackFile(java.lang.String data_file_path,
                                           java.lang.String reference_info_path,
                                           java.lang.String tracks_info,
                                           java.lang.String user_path,
                                           java.lang.String options,
                                           boolean is64bit)

Parameters:

data_file_path -

reference_info_path -

tracks_info -

user_path -

options -

is64bit -

Returns:

getJNLPForProjectFile

public java.lang.String getJNLPForProjectFile(java.lang.String[] cmdline,
                                     byte[] workspace,
                                     byte[] session,
                                     boolean is64bit)

Used to save current jnlp

Parameters:

cmdline -

session_info -

is64bit -

Returns:

readJNLPTemplateFromResource

protected java.lang.String readJNLPTemplateFromResource(java.lang.String name,
                                            boolean is64bit)

Retrieves the jnlp template from the jar file

Parameters:

name - path to jnlp template in jar file

Returns:

getJNLPFromJobId

public java.lang.String getJNLPFromJobId(long job_id,
                                boolean is64bit)

Used to get jnlp from job id as number. Assumes actual name is 012/123456

Parameters:

job_id -

is64bit -

Returns:

getJNLPFromCmdLine

public java.lang.String getJNLPFromCmdLine(java.lang.String[] cmdline,
                                  boolean is64bit)

Used to get jnlp from job id as number. Assumes actual name is 012/123456

Parameters:

job_id -

is64bit -

Returns:

getSMRTJNLPOptions

public java.lang.String getSMRTJNLPOptions(java.lang.String options)

main

public static void main(java.lang.String[] args)